Henry V Baker

Henry V Baker, PhD

Hazel Kitzman Professor And Chair, Department Of Molecular Genetics And Microbiology; Professor Of Surgery

Department: Molecular Genetics & Microbiology
Business Phone: (352) 273-8111
Business Email: hvbaker@ufl.edu

Publications

2021
The role of bone marrow microRNA (miR) in erythropoietic dysfunction after severe trauma.
Surgery. 169(5):1206-1212 [DOI] 10.1016/j.surg.2020.11.029. [PMID] 33413921.
2021
Transcriptomic responses from improved murine sepsis models can better mimic human surgical sepsis.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 35(2) [DOI] 10.1096/fj.202002150R. [PMID] 33140449.
2020
Effect of Beta-Blockade on the Expression of Regulatory MicroRNA after Severe Trauma and Chronic Stress.
Journal of the American College of Surgeons. 230(1):121-129 [DOI] 10.1016/j.jamcollsurg.2019.09.011. [PMID] 31672639.
2020
Human Regulatory T Cells From Umbilical Cord Blood Display Increased Repertoire Diversity and Lineage Stability Relative to Adult Peripheral Blood.
Frontiers in immunology. 11 [DOI] 10.3389/fimmu.2020.00611. [PMID] 32351504.
2020
Identification of Unique mRNA and miRNA Expression Patterns in Bone Marrow Hematopoietic Stem and Progenitor Cells After Trauma in Older Adults.
Frontiers in immunology. 11 [DOI] 10.3389/fimmu.2020.01289. [PMID] 32670283.
2020
Prospective Validation of a Transcriptomic Metric in Severe Trauma.
Annals of surgery. 271(5):802-810 [DOI] 10.1097/SLA.0000000000003204. [PMID] 30688688.
2019
Metformin Inhibits the Type 1 IFN Response in Human CD4+ T Cells.
Journal of immunology (Baltimore, Md. : 1950). 203(2):338-348 [DOI] 10.4049/jimmunol.1801651. [PMID] 31160534.
2019
Myeloid-derived suppressor cell function and epigenetic expression evolves over time after surgical sepsis.
Critical care (London, England). 23(1) [DOI] 10.1186/s13054-019-2628-x. [PMID] 31722736.
2019
Transcriptome analysis of human monocytic cells infected with Burkholderia species and exploration of pentraxin-3 as part of the innate immune response against the organisms.
BMC medical genomics. 12(1) [DOI] 10.1186/s12920-019-0575-7. [PMID] 31492148.
2018
Hyperacute Monocyte Gene Response Patterns Are Associated With Lower Extremity Vein Bypass Graft Failure.
Circulation. Genomic and precision medicine. 11(3) [DOI] 10.1161/CIRCGEN.117.001970. [PMID] 29530886.
2018
Impact of toll-like receptor 4 stimulation on human neonatal neutrophil spontaneous migration, transcriptomics, and cytokine production.
Journal of molecular medicine (Berlin, Germany). 96(7):673-684 [DOI] 10.1007/s00109-018-1646-5. [PMID] 29808244.
2018
Persistent inflammation, immunosuppression, and catabolism and the development of chronic critical illness after surgery.
Surgery. 164(2):178-184 [DOI] 10.1016/j.surg.2018.04.011. [PMID] 29807651.
2018
Validation of the Sepsis MetaScore for Diagnosis of Neonatal Sepsis.
Journal of the Pediatric Infectious Diseases Society. 7(2):129-135 [DOI] 10.1093/jpids/pix021. [PMID] 28419265.
2017
Inhibition of PI3K/Akt/mTOR signaling in PI3KR2-overexpressing colon cancer stem cells reduces tumor growth due to apoptosis.
Oncotarget. 8(31):50476-50488 [DOI] 10.18632/oncotarget.9919. [PMID] 28881576.
2017
LPS Stimulation of Cord Blood Reveals a Newborn-Specific Neutrophil Transcriptomic Response and Cytokine Production.
Shock (Augusta, Ga.). 47(5):606-614 [DOI] 10.1097/SHK.0000000000000800. [PMID] 28410545.
2017
Neutrophil chemotaxis and transcriptomics in term and preterm neonates.
Translational research : the journal of laboratory and clinical medicine. 190:4-15 [DOI] 10.1016/j.trsl.2017.08.003. [PMID] 28873345.
2017
The Epidemiology of Chronic Critical Illness After Severe Traumatic Injury at Two Level-One Trauma Centers.
Critical care medicine. 45(12):1989-1996 [DOI] 10.1097/CCM.0000000000002697. [PMID] 28837430.
2017
Unique transcriptomic response to sepsis is observed among patients of different age groups.
PloS one. 12(9) [DOI] 10.1371/journal.pone.0184159. [PMID] 28886074.
2016
Effects of Long-Term Exercise on Age-Related Hearing Loss in Mice
The Journal of Neuroscience. 36(44):11308-11319 [DOI] 10.1523/JNEUROSCI.2493-16.2016.
2016
Gene Expression Patterns in Peripheral Blood Leukocytes in Patients with Recurrent Ciguatera Fish Poisoning: Preliminary Studies.
Harmful algae. 57(B):35-38 [PMID] 27594814.
View on: PubMed
2016
Histological chorioamnionitis shapes the neonatal transcriptomic immune response.
Early human development. 98:1-6 [DOI] 10.1016/j.earlhumdev.2016.06.001. [PMID] 27318328.
2016
Molecular Characterization of the Genital Organizer: Gene Expression Profile of the Mouse Urethral Plate Epithelium.
The Journal of urology. 196(4):1295-302 [DOI] 10.1016/j.juro.2016.04.091. [PMID] 27173853.
2016
Patterns of gene expression among murine models of hemorrhagic shock/trauma and sepsis.
Physiological genomics. 48(2):135-44 [DOI] 10.1152/physiolgenomics.00072.2015. [PMID] 26578697.
2016
Sex-based differences in the genomic response, innate immunity, organ dysfunction, and clinical outcomes after severe blunt traumatic injury and hemorrhagic shock.
The journal of trauma and acute care surgery. 81(3):478-85 [DOI] 10.1097/TA.0000000000001113. [PMID] 27306446.
2016
Systemic inflammation as a predictor of clinical outcomes after lower extremity angioplasty/stenting.
Journal of vascular surgery. 64(3):766-778.e5 [DOI] 10.1016/j.jvs.2015.04.399. [PMID] 26054584.
2016
Targeting IL-17A attenuates neonatal sepsis mortality induced by IL-18.
Proceedings of the National Academy of Sciences of the United States of America. 113(19):E2627-35 [DOI] 10.1073/pnas.1515793113. [PMID] 27114524.
2015
A Comparative Analysis of Gene Expression Profiles during Skin Regeneration in Mus and Acomys.
PloS one. 10(11) [DOI] 10.1371/journal.pone.0142931. [PMID] 26606282.
2015
A Detailed Characterization of the Dysfunctional Immunity and Abnormal Myelopoiesis Induced by Severe Shock and Trauma in the Aged.
Journal of immunology (Baltimore, Md. : 1950). 195(5):2396-407 [DOI] 10.4049/jimmunol.1500984. [PMID] 26246141.
2015
Advanced age is associated with worsened outcomes and a unique genomic response in severely injured patients with hemorrhagic shock.
Critical care (London, England). 19 [DOI] 10.1186/s13054-015-0788-x. [PMID] 25880307.
2015
Divergent Phenotypes of Human Regulatory T Cells Expressing the Receptors Tigit and Cd226
Journal of Immunology. 195(1):145-155 [DOI] 10.4049/jimmunol.1402381. [PMID] 25994968.
2015
Human Myeloid Derived Suppressor Cells Induce Immune Suppression After Severe Sepsis
Shock. 43(6, 1)
2015
Il-18 Increases Murine Neonatal Sepsis Mortality Via Il-17a
Shock. 43(6, 1):89-90
2015
Patterns of Gene Expression Among Murine Models of Hemorrhagic Shock Trauma and Sepsis
Shock. 43(6, 1):111-112
2015
Postnatal Age Is a Critical Determinant of the Neonatal Host Response to Sepsis.
Molecular medicine (Cambridge, Mass.). 21:496-504 [DOI] 10.2119/molmed.2015.00064. [PMID] 26052715.
2015
The Genomic Response After Burn Injury Predicts Organ Dysfunction and Mortality
Shock. 43(6, 1)
2014
A better understanding of why murine models of trauma do not recapitulate the human syndrome.
Critical care medicine. 42(6):1406-13 [DOI] 10.1097/CCM.0000000000000222. [PMID] 24413577.
2014
A Comparison of the Leukocyte Genomic Responses To Sterile Or Infectious Inflammation
Shock. 41(2)
2014
A mitogen-activated protein kinase/extracellular signal-regulated kinase kinase (MEK)-dependent transcriptional program controls activation of the early growth response 1 (EGR1) gene during amino acid limitation.
The Journal of biological chemistry. 289(35):24665-79 [DOI] 10.1074/jbc.M114.565028. [PMID] 25028509.
2014
A unifying gene signature for adenoid cystic cancer identifies parallel MYB-dependent and MYB-independent therapeutic targets.
Oncotarget. 5(24):12528-42 [PMID] 25587024.
View on: PubMed
2014
Aged mice are unable to mount an effective myeloid response to sepsis.
Journal of immunology (Baltimore, Md. : 1950). 192(2):612-22 [DOI] 10.4049/jimmunol.1302109. [PMID] 24337739.
2014
Differential Wbc Gene Expression Is Associated With Pneumonia Development After Burn Injury
Shock. 41(2):57-58
2014
Genomic Analysis of Individual Leukocyte Populations After Severe Trauma
Shock. 41(2)
2014
Host responses to sepsis vary in different low-lethality murine models.
PloS one. 9(5) [DOI] 10.1371/journal.pone.0094404. [PMID] 24788351.
2014
Inadequate Pmn Chemokine Receptor Expression After Polymicrobial Abdominal Sepsis Contributes To Defective Pmn Chemotaxis in the Aged
Shock. 41(2)
2014
Monocyte Genomic Signatures Correlate With Discharge Disposition and Mortality in Severely Injured Trauma Patients
Shock. 41(2)
2014
Persistent inflammation, immunosuppression, and catabolism syndrome after severe blunt trauma.
The journal of trauma and acute care surgery. 76(1):21-9; discussion 29 [DOI] 10.1097/TA.0b013e3182ab1ab5. [PMID] 24368353.
2014
Protective immunity and defects in the neonatal and elderly immune response to sepsis.
Journal of immunology (Baltimore, Md. : 1950). 192(7):3156-65 [DOI] 10.4049/jimmunol.1301726. [PMID] 24591376.
2014
Severe Acidosis Following Injury Is Associated With Altered Genomic Inflammatory Signature and Increased Morbidity
Shock. 41(2):91-92
2014
The Female Transcriptomic Response After Severe Trauma Is Different From That of Males
Shock. 41(2)
2013
A genomic analysis of Clostridium difficile infections in blunt trauma patients.
The journal of trauma and acute care surgery. 74(1):334-8 [DOI] 10.1097/TA.0b013e3182789426. [PMID] 23271108.
2013
Development of a genomic metric that can be rapidly used to predict clinical outcome in severely injured trauma patients.
Critical care medicine. 41(5):1175-85 [DOI] 10.1097/CCM.0b013e318277131c. [PMID] 23388514.
2013
Genomic responses in mouse models poorly mimic human inflammatory diseases.
Proceedings of the National Academy of Sciences of the United States of America. 110(9):3507-12 [DOI] 10.1073/pnas.1222878110. [PMID] 23401516.
2013
Identification and description of a novel murine model for polytrauma and shock.
Critical care medicine. 41(4):1075-85 [DOI] 10.1097/CCM.0b013e318275d1f9. [PMID] 23399937.
2013
Transcriptomic analysis of PNN- and ESRP1-regulated alternative pre-mRNA splicing in human corneal epithelial cells.
Investigative ophthalmology & visual science. 54(1):697-707 [DOI] 10.1167/iovs.12-10695. [PMID] 23299472.
2012
Bacillus anthracis’ lethal toxin induces broad transcriptional responses in human peripheral monocytes.
BMC immunology. 13 [DOI] 10.1186/1471-2172-13-33. [PMID] 22747600.
2012
Murine lupus susceptibility locus Sle1c2 mediates CD4+ T cell activation and maps to estrogen-related receptor γ.
Journal of immunology (Baltimore, Md. : 1950). 189(2):793-803 [DOI] 10.4049/jimmunol.1200411. [PMID] 22711888.
2012
Pre-B cell leukemia homeobox 1 is associated with lupus susceptibility in mice and humans.
Journal of immunology (Baltimore, Md. : 1950). 188(2):604-14 [DOI] 10.4049/jimmunol.1002362. [PMID] 22180614.
2012
Severe injury is associated with insulin resistance, endoplasmic reticulum stress response, and unfolded protein response.
Annals of surgery. 255(2):370-8 [DOI] 10.1097/SLA.0b013e31823e76e7. [PMID] 22241293.
2011
A genomic storm in critically injured humans.
The Journal of experimental medicine. 208(13):2581-90 [DOI] 10.1084/jem.20111354. [PMID] 22110166.
2011
Cyclin-dependent kinase inhibitor Cdkn2c regulates B cell homeostasis and function in the NZM2410-derived murine lupus susceptibility locus Sle2c1.
Journal of immunology (Baltimore, Md. : 1950). 186(12):6673-82 [DOI] 10.4049/jimmunol.1002544. [PMID] 21543644.
2011
Detection of altered extracellular matrix in surface layers of unstable carotid plaque: an optical spectroscopy, birefringence and microarray genetic analysis.
Photochemistry and photobiology. 87(5):1164-72 [DOI] 10.1111/j.1751-1097.2011.00960.x. [PMID] 21699546.
2011
Gene expression changes in the human diaphragm after cardiothoracic surgery.
The Journal of thoracic and cardiovascular surgery. 142(5):1214-22, 1222.e1 [DOI] 10.1016/j.jtcvs.2011.02.025. [PMID] 21463877.
2011
Microfluidics-based capture of human neutrophils for expression analysis in blood and bronchoalveolar lavage.
Laboratory investigation; a journal of technical methods and pathology. 91(12):1787-95 [DOI] 10.1038/labinvest.2011.94. [PMID] 21931299.
2011
Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles.
G3 (Bethesda, Md.). 1(6):427-36 [DOI] 10.1534/g3.111.000596. [PMID] 22384353.
2011
Polymicrobial Periodontal Pathogen Transcriptomes in Calvarial Bone and Soft Tissue
Molecular oral microbiology. 26(5):303-320 [DOI] 10.1111/j.2041-1014.2011.00619.x. [PMID] 21896157.
2011
Roles of vaccinia virus genes E3L and K3L and host genes PKR and RNase L during intratracheal infection of C57BL/6 mice.
Journal of virology. 85(1):550-67 [DOI] 10.1128/JVI.00254-10. [PMID] 20943971.
2011
Transcriptome Analysis of Luxs-Deficient Streptococcus Mutans Grown in Biofilms
Molecular oral microbiology. 26(1):2-18 [DOI] 10.1111/j.2041-1014.2010.00581.x. [PMID] 21214869.
2010
Analysis of factorial time-course microarrays with application to a clinical study of burn injury.
Proceedings of the National Academy of Sciences of the United States of America. 107(22):9923-8 [DOI] 10.1073/pnas.1002757107. [PMID] 20479259.
2010
Differences in outcome between obese and nonobese patients following severe blunt trauma are not consistent with an early inflammatory genomic response.
Critical care medicine. 38(1):51-8 [DOI] 10.1097/CCM.0b013e3181b08089. [PMID] 19661803.
2010
Differential Gene Expression Patterns in Patients With Recurrent Aphthous Stomatitis
Oral Diseases. 16:525-526
2010
Expression profiling after activation of amino acid deprivation response in HepG2 human hepatoma cells.
Physiological genomics. 41(3):315-27 [DOI] 10.1152/physiolgenomics.00217.2009. [PMID] 20215415.
2010
Incidence, clinical predictors, genomics, and outcome of acute kidney injury among trauma patients.
Annals of surgery. 252(1):158-65 [DOI] 10.1097/SLA.0b013e3181deb6bc. [PMID] 20562612.
2010
Porphyromonas gingivalis infection-induced tissue and bone transcriptional profiles.
Molecular oral microbiology. 25(1):61-74 [DOI] 10.1111/j.2041-1014.2009.00555.x. [PMID] 20331794.
2010
Role of the ATM-checkpoint kinase 2 pathway in CDT-mediated apoptosis of gingival epithelial cells.
PloS one. 5(7) [DOI] 10.1371/journal.pone.0011714. [PMID] 20668524.
2010
Tannerella Forsythia Infection-Induced Calvarial Bone and Soft Tissue Transcriptional Profiles
Molecular oral microbiology. 25:317-330
2010
Use of a commercially available relaxin test for detection of pregnancy in cats.
Journal of the American Veterinary Medical Association. 237(11):1267-74 [DOI] 10.2460/javma.237.11.1267. [PMID] 21118012.
2009
A limited innate immune response is induced by a replication-defective herpes simplex virus vector following delivery to the murine central nervous system.
Journal of neurovirology. 15(5-6):411-24 [DOI] 10.3109/13550280903473452. [PMID] 20095947.
2009
Characterization of the Prolonged Genomic Changes Induced By a Severe Burn Injury
Critical Care Medicine. 37
2009
Hemorrhage and subsequent allogenic red blood cell transfusion are associated with characteristic monocyte messenger RNA expression patterns in patients after multiple injury-a genome wide view.
The Journal of trauma. 67(4):792-801 [DOI] 10.1097/TA.0b013e31819d9c04. [PMID] 19820587.
2009
Myxoma Viral Serpin, Serp-1, Inhibits Human Monocyte Adhesion Through Regulation of Actin-Binding Protein Filamin B
Journal of leukocyte biology. 85(3):418-426 [DOI] 10.1189/jlb.0808506. [PMID] 19052145.
2009
The addition of tumor necrosis factor plus beta interferon induces a novel synergistic antiviral state against poxviruses in primary human fibroblasts.
Journal of virology. 83(2):498-511 [DOI] 10.1128/JVI.01376-08. [PMID] 18971273.
2009
The degree of microbiome complexity influences the epithelial response to infection.
BMC genomics. 10 [DOI] 10.1186/1471-2164-10-380. [PMID] 19689803.
2009
Voluntary exercise prevents the obese and diabetic metabolic syndrome of the melanocortin-4 receptor knockout mouse.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 23(2):642-55 [DOI] 10.1096/fj.08-109686. [PMID] 18971258.
2008
ALDH isozymes downregulation affects cell growth, cell motility and gene expression in lung cancer cells.
Molecular cancer. 7 [DOI] 10.1186/1476-4598-7-87. [PMID] 19025616.
2008
Beyond good and evil in the oral cavity: insights into host-microbe relationships derived from transcriptional profiling of gingival cells.
Journal of dental research. 87(3):203-23 [PMID] 18296603.
View on: PubMed
2008
Beyond good and evil in the oral cavity: insights into host-microbe relationships derived from transcriptional profiling of gingival cells.
. 87(3) [DOI] 10.1177/154405910808700302. [PMID] 18296603.
2008
Comparison of longitudinal leukocyte gene expression after burn injury or trauma-hemorrhage in mice.
Physiological genomics. 32(3):299-310 [PMID] 17986522.
View on: PubMed
2008
Genome-wide analysis of aging and learning-related genes in the hippocampal dentate gyrus.
Neurobiology of learning and memory. 89(4):379-96 [DOI] 10.1016/j.nlm.2007.11.006. [PMID] 18234529.
2008
Microfluidic leukocyte isolation for gene expression analysis in critically ill hospitalized patients.
Clinical chemistry. 54(5):891-900 [DOI] 10.1373/clinchem.2007.099150. [PMID] 18375483.
2008
Proinflammatory Serpin Reactive Center Loop Mutant Induces Aortic Aneurysm Formation and Alters Gene Expression in Monocytes
Arteriosclerosis Thrombosis and Vascular Biology. 28
2008
Role of Porphyromonas gingivalis SerB in gingival epithelial cell cytoskeletal remodeling and cytokine production.
Infection and immunity. 76(6):2420-7 [DOI] 10.1128/IAI.00156-08. [PMID] 18391005.
2007
Changes in transcription within the CA1 field of the hippocampus are associated with age-related spatial learning impairments
Neurobiology of Learning and Memory. 87(1):21-41
2007
Changes in transcription within the CA1 field of the hippocampus are associated with age-related spatial learning impairments.
Neurobiology of learning and memory. 87(1):21-41 [PMID] 16829144.
View on: PubMed
2007
Gingival epithelial cell transcriptional responses to commensal and opportunistic oral microbial species.
Infection and immunity. 75(5):2540-7 [PMID] 17307939.
View on: PubMed
2007
Identification of cellular genes targeted by KSHV-encoded microRNAs.
PLoS pathogens. 3(5) [PMID] 17500590.
View on: PubMed
2007
Identification of genes expressed in the mouse limb using a novel ZPA microarray approach.
Gene expression patterns : GEP. 8(1):19-26 [PMID] 17911046.
View on: PubMed
2007
Kaposi’s sarcoma-associated herpesvirus encodes an ortholog of miR-155.
Journal of virology. 81(23):12836-45 [PMID] 17881434.
View on: PubMed
2007
Soy isoflavones exert differential effects on androgen responsive genes in LNCaP human prostate cancer cells.
The Journal of nutrition. 137(4):964-72 [PMID] 17374662.
View on: PubMed
2007
Stored packed red blood cell transfusion up-regulates inflammatory gene expression in circulating leukocytes.
Annals of surgery. 246(1):129-34 [PMID] 17592301.
View on: PubMed
2006
Cell-specific expression and pathway analyses reveal alterations in trauma-related human T cell and monocyte pathways.
Proceedings of the National Academy of Sciences of the United States of America. 103(42):15564-9 [PMID] 17032758.
View on: PubMed
2006
Commonality and differences in leukocyte gene expression patterns among three models of inflammation and injury.
Physiological genomics. 24(3):298-309 [PMID] 16478828.
View on: PubMed
2006
Different roles of EIIABMan and EIIGlc in regulation of energy metabolism, biofilm development, and competence in Streptococcus mutans.
Journal of bacteriology. 188(11):3748-56 [PMID] 16707667.
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2006
Distinctive characteristics of transcriptional profiles from two epithelial cell lines upon interaction with Actinobacillus actinomycetemcomitans.
Oral microbiology and immunology. 21(4):261-7 [PMID] 16842512.
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2006
Influence of BrpA on critical virulence attributes of Streptococcus mutans.
Journal of bacteriology. 188(8):2983-92 [PMID] 16585759.
View on: PubMed
2006
Soy isoflavones alter expression of genes associated with cancer progression, including interleukin-8, in androgen-independent PC-3 human prostate cancer cells.
The Journal of nutrition. 136(1):75-82 [PMID] 16365062.
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2005
A network-based analysis of systemic inflammation in humans.
Nature. 437(7061):1032-7 [PMID] 16136080.
View on: PubMed
2005
Application of genome-wide expression analysis to human health and disease.
Proceedings of the National Academy of Sciences of the United States of America. 102(13):4801-6 [PMID] 15781863.
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2005
Differential maturation of murine bone-marrow derived dendritic cells with lipopolysaccharide and tumor necrosis factor-alpha.
Journal of endotoxin research. 11(3):145-60 [PMID] 15949143.
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2005
Distinct transcriptional profiles characterize oral epithelium-microbiota interactions.
Cellular microbiology. 7(6):811-23 [PMID] 15888084.
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2005
Flagellin enhances NK cell proliferation and activation directly and through dendritic cell-NK cell interactions.
Journal of leukocyte biology. 78(4):888-97 [PMID] 16033815.
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2005
Functional genomics and gene expression profiling in sepsis: beyond class prediction.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 41 Suppl 7:S427-35 [PMID] 16237642.
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2005
Genome-wide monocytic mRNA expression in polytrauma patients for identification of clinical outcome.
Shock (Augusta, Ga.). 24(1):11-9 [PMID] 15988315.
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2005
The facial motor nucleus transcriptional program in response to peripheral nerve injury identifies Hn1 as a regeneration-associated gene.
Journal of neuroscience research. 82(5):581-91 [PMID] 16267826.
View on: PubMed
2004
An in vivo inducible gene of Pseudomonas aeruginosa encodes an anti-ExsA to suppress the type III secretion system.
Molecular microbiology. 54(2):307-20 [PMID] 15469505.
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2004
An inversion of 25 base pairs causes feline GM2 gangliosidosis variant.
Experimental neurology. 187(1):30-7 [PMID] 15081585.
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2004
Effects of CFTR, interleukin-10, and Pseudomonas aeruginosa on gene expression profiles in a CF bronchial epithelial cell Line.
Molecular therapy : the journal of the American Society of Gene Therapy. 10(3):562-73 [PMID] 15336656.
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2004
Genomic and proteomic determinants of outcome in patients undergoing thoracoabdominal aortic aneurysm repair.
Journal of immunology (Baltimore, Md. : 1950). 172(11):7103-9 [PMID] 15153533.
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2004
Impact on genetic networks in human macrophages by a CCR5 strain of human immunodeficiency virus type 1.
Journal of virology. 78(21):11477-86 [PMID] 15479790.
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2004
MucA-mediated coordination of type III secretion and alginate synthesis in Pseudomonas aeruginosa.
Journal of bacteriology. 186(22):7575-85 [PMID] 15516570.
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2004
Patterns of gene expression reveal a temporally orchestrated wound healing response in the injured spinal cord.
The Journal of neuroscience : the official journal of the Society for Neuroscience. 24(39):8562-76 [PMID] 15456830.
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2004
Phage matrix for isolation of glioma cell membrane proteins.
BioTechniques. 37(2):254-60 [PMID] 15335217.
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2004
Temporal patterns of gene expression in murine cutaneous burn wound healing.
Physiological genomics. 16(3):341-8 [PMID] 14966252.
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2004
Ultrasensitive detection of biomolecules with fluorescent dye-doped nanoparticles.
Analytical biochemistry. 334(1):135-44 [PMID] 15464962.
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2004
Whole blood and leukocyte RNA isolation for gene expression analyses.
Physiological genomics. 19(3):247-54 [PMID] 15548831.
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2003
Analysis of gene expression patterns in human postburn hypertrophic scars.
The Journal of burn care & rehabilitation. 24(6):371-7 [PMID] 14610421.
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2003
c-Jun NH2-terminal kinase-mediated signaling is essential for Pseudomonas aeruginosa ExoS-induced apoptosis.
Infection and immunity. 71(6):3361-70 [PMID] 12761120.
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2003
Microarray analysis of A549 cells infected with rabbitpox virus (RPV): a comparison of wild-type RPV and RPV deleted for the host range gene, SPI-1.
Virology. 315(2):322-34 [PMID] 14585335.
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2003
Molecular characterization of the acute inflammatory response to infections with gram-negative versus gram-positive bacteria.
Infection and immunity. 71(10):5803-13 [PMID] 14500502.
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2003
Mucosal immunization with helicobacter, CpG DNA, and cholera toxin is protective.
Infection and immunity. 71(1):40-6 [PMID] 12496147.
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2002
CpG oligodeoxynucleotides stimulate canine and feline immune cell proliferation.
Veterinary immunology and immunopathology. 84(3-4):223-36 [PMID] 11777536.
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2002
Isolation and characterization of multipotential mesenchymal stem cells from feline bone marrow.
Experimental hematology. 30(8):879-86 [PMID] 12160839.
View on: PubMed
2002
Mechanisms of the growth inhibitory effects of the isoflavonoid biochanin A on LNCaP cells and xenografts.
The Prostate. 52(3):201-12 [PMID] 12111696.
View on: PubMed
2002
Microarray analysis of gene expression patterns during healing of rat corneas after excimer laser photorefractive keratectomy.
Investigative ophthalmology & visual science. 43(6):1772-82 [PMID] 12036978.
View on: PubMed
2001
Implementing a community-based social marketing project to improve agricultural worker health.
Environmental health perspectives. 109 Suppl 3:461-8 [PMID] 11427397.
View on: PubMed
2000
Understanding the growth phenotype of the yeast gcr1 mutant in terms of global genomic expression patterns.
Journal of bacteriology. 182(17):4970-8 [PMID] 10940042.
View on: PubMed
1998
Multiple domains of repressor activator protein 1 contribute to facilitated binding of glycolysis regulatory protein 1.
Proceedings of the National Academy of Sciences of the United States of America. 95(24):14112-7 [PMID] 9826662.
View on: PubMed
1996
Activation mechanism of the multifunctional transcription factor repressor-activator protein 1 (Rap1p).
Molecular and cellular biology. 16(6):3187-96 [PMID] 8649429.
View on: PubMed
1996
DNA-binding properties of the yeast transcriptional activator, Gcr1p.
Yeast (Chichester, England). 12(4):307-17 [PMID] 8701604.
View on: PubMed
1993
A simplified vacuum blotting method for genomic sequencing and in vivo footprinting.
BioTechniques. 15(3):362-3 [PMID] 8217138.
View on: PubMed
1993
Concerted action of the transcriptional activators REB1, RAP1, and GCR1 in the high-level expression of the glycolytic gene TPI.
Molecular and cellular biology. 13(1):543-50 [PMID] 8417350.
View on: PubMed
1992
Characterization of the DNA-binding activity of GCR1: in vivo evidence for two GCR1-binding sites in the upstream activating sequence of TPI of Saccharomyces cerevisiae.
Molecular and cellular biology. 12(6):2690-700 [PMID] 1588965.
View on: PubMed
1991
GCR1 of Saccharomyces cerevisiae encodes a DNA binding protein whose binding is abolished by mutations in the CTTCC sequence motif.
Proceedings of the National Academy of Sciences of the United States of America. 88(21):9443-7 [PMID] 1946357.
View on: PubMed
1990
Characterization of TPI gene expression in isogeneic wild-type and gcr1-deletion mutant strains of Saccharomyces cerevisiae.
Nucleic acids research. 18(23):7099-107 [PMID] 2263469.
View on: PubMed

Grants

Jul 2019 ACTIVE
Molecular Biology in Burns and Trauma
Role: Other
Funding: NATL INST OF HLTH NIGMS
Jun 2018 – May 2020
PICS: A New Horizon for Surgical Critical Care
Role: Co-Investigator
Funding: NATL INST OF HLTH NIGMS
Jun 2017 – May 2018
PICS: A New Horizon for Surgical Critical Care
Role: Co-Investigator
Funding: NATL INST OF HLTH NIGMS
Jun 2016 – May 2017
PICS: A New Horizon for Surgical Critical Care
Role: Project Manager
Funding: NATL INST OF HLTH NIGMS
Jun 2015 – May 2016
PICS: A New Horizon for Surgical Critical Care
Role: Project Manager
Funding: NATL INST OF HLTH NIGMS
Jan 2015 – Jun 2017
JVI Editorship
Role: Principal Investigator
Funding: American Society for Microbiology
Aug 2014 – Feb 2019
Brannan Memorial Fund
Role: Principal Investigator
Funding: UF FOU
Jun 2013 – Apr 2017
Validation of a Genomics Based Prognostic in Severe Trauma
Role: Project Manager
Funding: NATL INST OF HLTH NHLBI
Jul 2012 – Feb 2019
Pinkerton Memorial Fund – UFF Transfer Account
Role: Principal Investigator
Funding: UF FOU
Jul 2011 ACTIVE
Affymetrix and Illumina Gene Services
Role: Principal Investigator
Funding: MULTIPLE SPONSORS
May 2009 – Sep 2020
Hazel Kitzman Professorship – UFF Transfer Account
Role: Principal Investigator
Funding: UF FOU

Teaching Profile

Courses Taught
2012-2021
GMS7191 Research Conference
2016,2019-2021
GMS6943 Master’s Translational Biotechnology Internship
2014-2015,2017-2020
GMS6065 Fundamentals of Cancer Biology
2014-2021
GMS6014 Applications of Bioinformatics to Genetics
2018
GMS7980 Research for Doctoral Dissertation
2018
GMS7979 Advanced Research
2015-2017
GMS6506 Biologic Drug Development
2008,2010-2013,2013
GMS6155 DNA Microarray Data Analysis
2006-2008
GMS6920 Genetics Journal Colloquy
2006
GMS6181 Spec Topics Microbiol

Contact Details

Phones:
Business:
(352) 273-8111
Emails:
Business:
hvbaker@ufl.edu