Jodi L Bubenik,
Assistant Scientist (faculty)
Department:
Molecular Genetics & Microbiology
Business Phone:
(352) 273-8156
Business Email:
jbubenik@ufl.edu
Publications
2024
Spaceflight effects on human vascular smooth muscle cell phenotype and function.
NPJ microgravity.
10(1)
[DOI] 10.1038/s41526-024-00380-w.
[PMID] 38548798.
2023
N6-methyladenosine in 7SK small nuclear RNA underlies RNA polymerase II transcription regulation.
Molecular cell.
83(21):3818-3834.e7
[DOI] 10.1016/j.molcel.2023.09.020.
[PMID] 37820733.
2022
Myotonic dystrophy type 1 embryonic stem cells show decreased myogenic potential, increased CpG methylation at the DMPK locus and RNA mis-splicing.
Biology open.
11(1)
[DOI] 10.1242/bio.058978.
[PMID] 35019138.
2021
Generation of a Novel SARS-CoV-2 Sub-genomic RNA Due to the R203K/G204R Variant in Nucleocapsid: Homologous Recombination has Potential to Change SARS-CoV-2 at Both Protein and RNA Level.
Pathogens & immunity.
6(2):27-49
[DOI] 10.20411/pai.v6i2.460.
[PMID] 34541432.
2021
Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and RNA level.
bioRxiv : the preprint server for biology.
[DOI] 10.1101/2020.04.10.029454.
[PMID] 33880475.
2020
RNA structure probing to characterize RNA-protein interactions on a low abundance pre-mRNA in living cells.
RNA (New York, N.Y.).
27(3):343-58
[DOI] 10.1261/rna.077263.120.
[PMID] 33310817.
2019
Cell-type-specific dysregulation of RNA alternative splicing in short tandem repeat mouse knockin models of myotonic dystrophy.
Genes & development.
33(23-24):1635-1640
[DOI] 10.1101/gad.328963.119.
[PMID] 31624084.
2018
STRring up Cancer with lncRNA.
Molecular cell.
72(3):399-401
[DOI] 10.1016/j.molcel.2018.10.026.
[PMID] 30388407.
2017
RAN Translation Regulated by Muscleblind Proteins in Myotonic Dystrophy Type 2.
Neuron.
95(6):1292-1305.e5
[DOI] 10.1016/j.neuron.2017.08.039.
[PMID] 28910618.
2015
Differential Effects of Tra2ß Isoforms on HIV-1 RNA Processing and Expression.
PloS one.
10(5)
[DOI] 10.1371/journal.pone.0125315.
[PMID] 25970345.
2014
Characterization of the UGA-recoding and SECIS-binding activities of SECIS-binding protein 2.
RNA biology.
11(11):1402-13
[DOI] 10.1080/15476286.2014.996472.
[PMID] 25692238.
2013
Alternative transcripts and 3’UTR elements govern the incorporation of selenocysteine into selenoprotein S.
PloS one.
8(4)
[DOI] 10.1371/journal.pone.0062102.
[PMID] 23614019.
2011
Identification of a signature motif for the eIF4a3-SECIS interaction.
Nucleic acids research.
39(17):7730-9
[DOI] 10.1093/nar/gkr446.
[PMID] 21685449.
2009
Eukaryotic initiation factor 4a3 is a selenium-regulated RNA-binding protein that selectively inhibits selenocysteine incorporation.
Molecular cell.
35(4):479-89
[DOI] 10.1016/j.molcel.2009.06.026.
[PMID] 19716792.
2009
Known turnover and translation regulatory RNA-binding proteins interact with the 3′ UTR of SECIS-binding protein 2.
RNA biology.
6(1):73-83
[PMID] 19106619.
2007
Altered RNA binding activity underlies abnormal thyroid hormone metabolism linked to a mutation in selenocysteine insertion sequence-binding protein 2.
The Journal of biological chemistry.
282(48):34653-62
[PMID] 17901054.
Grants
Feb 2017
– Jan 2020
Novel Mouse Knockin Models for Myotonic Dystrophy
Role: Other
Funding: MUSCULAR DYSTROPHY ASSO
Contact Details
Phones:
- Business:
- (352) 273-8156
Emails:
- Business:
- jbubenik@ufl.edu
Addresses:
- Business Mailing:
-
PO Box 103633
GAINESVILLE FL 32610 - Business Street:
-
2033 MOWRY RD
GAINESVILLE FL 32610